get_interaction_network
Generate and analyze protein interaction networks for multiple proteins using species-specific data, interaction types, and confidence scores. Expand networks and extract insights for functional or physical associations.
Instructions
Build and analyze protein interaction network for multiple proteins
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| add_nodes | No | Number of additional interacting proteins to add (default: 0) | |
| network_type | No | Type of network to build (default: functional) | |
| protein_ids | Yes | List of protein identifiers | |
| required_score | No | Minimum interaction confidence score (0-1000, default: 400) | |
| species | No | Species name or NCBI taxonomy ID (default: 9606 for human) |
Input Schema (JSON Schema)
{
"properties": {
"add_nodes": {
"description": "Number of additional interacting proteins to add (default: 0)",
"maximum": 100,
"minimum": 0,
"type": "number"
},
"network_type": {
"description": "Type of network to build (default: functional)",
"enum": [
"functional",
"physical"
],
"type": "string"
},
"protein_ids": {
"description": "List of protein identifiers",
"items": {
"type": "string"
},
"type": "array"
},
"required_score": {
"description": "Minimum interaction confidence score (0-1000, default: 400)",
"maximum": 1000,
"minimum": 0,
"type": "number"
},
"species": {
"description": "Species name or NCBI taxonomy ID (default: 9606 for human)",
"type": "string"
}
},
"required": [
"protein_ids"
],
"type": "object"
}