GTEx MCP Server

get_sqtl_results

Retrieve splicing quantitative trait loci (sQTL) results for a specific gene from GTEx data to identify genetic variants influencing alternative splicing patterns.

Instructions

Get splicing QTL (sQTL) results for a gene

Input Schema

Name	Required	Description	Default
`datasetId`	No	GTEx dataset ID (default: gtex_v8)	gtex_v8
`gencodeId`	Yes	GENCODE gene ID (e.g., ENSG00000223972.5)
`tissueSiteDetailId`	No	Tissue site detail ID (optional, for tissue-specific results)

Input Schema (JSON Schema)

{
  "properties": {
    "datasetId": {
      "default": "gtex_v8",
      "description": "GTEx dataset ID (default: gtex_v8)",
      "type": "string"
    },
    "gencodeId": {
      "description": "GENCODE gene ID (e.g., ENSG00000223972.5)",
      "type": "string"
    },
    "tissueSiteDetailId": {
      "description": "Tissue site detail ID (optional, for tissue-specific results)",
      "type": "string"
    }
  },
  "required": [
    "gencodeId"
  ],
  "type": "object"
}

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