GTEx MCP Server

get_variants

Retrieve genetic variants within a specified genomic region from GTEx datasets to support genomic research and analysis.

Instructions

Get genetic variants in a genomic region

Input Schema

Name	Required	Description	Default
`chr`	Yes	Chromosome (e.g., chr1, chr2, chrX)
`datasetId`	No	GTEx dataset ID (default: gtex_v8)	gtex_v8
`end`	Yes	End position (1-based)
`start`	Yes	Start position (1-based)

Input Schema (JSON Schema)

{
  "properties": {
    "chr": {
      "description": "Chromosome (e.g., chr1, chr2, chrX)",
      "type": "string"
    },
    "datasetId": {
      "default": "gtex_v8",
      "description": "GTEx dataset ID (default: gtex_v8)",
      "type": "string"
    },
    "end": {
      "description": "End position (1-based)",
      "type": "integer"
    },
    "start": {
      "description": "Start position (1-based)",
      "type": "integer"
    }
  },
  "required": [
    "chr",
    "start",
    "end"
  ],
  "type": "object"
}

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